| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SB4_02140 | SB4_03125 | SB4_02140 | SB4_03125 | Recombinase RecJ; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA helicase UvrD; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the helicase family. UvrD subfamily. | 0.606 |
| SB4_02140 | SB4_03225 | SB4_02140 | SB4_03225 | Recombinase RecJ; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATP-dependent DNA helicase RecG; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.658 |
| SB4_02140 | SB4_07230 | SB4_02140 | SB4_07230 | Recombinase RecJ; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATP-dependent DNA helicase RecQ; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.928 |
| SB4_02140 | SB4_10910 | SB4_02140 | SB4_10910 | Recombinase RecJ; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA mismatch repair protein MutS; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DNA mismatch repair MutS family. | 0.638 |
| SB4_02140 | SB4_11345 | SB4_02140 | SB4_11345 | Recombinase RecJ; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.633 |
| SB4_02140 | SB4_13325 | SB4_02140 | SB4_13325 | Recombinase RecJ; Derived by automated computational analysis using gene prediction method: Protein Homology. | Phosphate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.658 |
| SB4_02140 | SB4_16225 | SB4_02140 | SB4_16225 | Recombinase RecJ; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily. | 0.661 |
| SB4_02140 | mutL | SB4_02140 | SB4_12545 | Recombinase RecJ; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. | 0.650 |
| SB4_02140 | priA | SB4_02140 | SB4_10885 | Recombinase RecJ; Derived by automated computational analysis using gene prediction method: Protein Homology. | Primosome assembly protein PriA; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily. | 0.723 |
| SB4_02140 | topA | SB4_02140 | SB4_11880 | Recombinase RecJ; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.700 |
| SB4_03125 | SB4_02140 | SB4_03125 | SB4_02140 | DNA helicase UvrD; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the helicase family. UvrD subfamily. | Recombinase RecJ; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.606 |
| SB4_03125 | SB4_03225 | SB4_03125 | SB4_03225 | DNA helicase UvrD; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the helicase family. UvrD subfamily. | ATP-dependent DNA helicase RecG; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.474 |
| SB4_03125 | SB4_07230 | SB4_03125 | SB4_07230 | DNA helicase UvrD; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the helicase family. UvrD subfamily. | ATP-dependent DNA helicase RecQ; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.432 |
| SB4_03125 | SB4_11345 | SB4_03125 | SB4_11345 | DNA helicase UvrD; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the helicase family. UvrD subfamily. | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.548 |
| SB4_03125 | mutL | SB4_03125 | SB4_12545 | DNA helicase UvrD; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the helicase family. UvrD subfamily. | DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. | 0.533 |
| SB4_03125 | priA | SB4_03125 | SB4_10885 | DNA helicase UvrD; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the helicase family. UvrD subfamily. | Primosome assembly protein PriA; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily. | 0.411 |
| SB4_03225 | SB4_02140 | SB4_03225 | SB4_02140 | ATP-dependent DNA helicase RecG; Derived by automated computational analysis using gene prediction method: Protein Homology. | Recombinase RecJ; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.658 |
| SB4_03225 | SB4_03125 | SB4_03225 | SB4_03125 | ATP-dependent DNA helicase RecG; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA helicase UvrD; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the helicase family. UvrD subfamily. | 0.474 |
| SB4_03225 | SB4_07230 | SB4_03225 | SB4_07230 | ATP-dependent DNA helicase RecG; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATP-dependent DNA helicase RecQ; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.652 |
| SB4_03225 | SB4_11345 | SB4_03225 | SB4_11345 | ATP-dependent DNA helicase RecG; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.437 |