STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SB4_04625Aldo/keto reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (276 aa)    
Predicted Functional Partners:
SB4_17280
5-methyltetrahydrofolate--homocysteine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.812
tal
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 2 subfamily.
  
 0.724
SB4_08950
Pyridoxal 4-dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.613
SB4_12745
Hypothetical protein; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
   
    0.596
SB4_06265
Aldo/keto reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
0.592
SB4_11270
Aminoglycoside phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.583
SB4_14620
Aldo/keto reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
0.576
SB4_18680
General secretion pathway protein GspA; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.576
SB4_15975
Aldo/keto reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
0.563
SB4_18780
Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
0.555
Your Current Organism:
Sphingomonas sanguinis
NCBI taxonomy Id: 33051
Other names: 13937T, ATCC 51382, CIP 104197, DSM 13885, GIFU 2397, GIFU:2397, HAMBI 2010, IFO 13937, JCM 7514, LMG 17325, LMG:17325, NBRC 13937, S. sanguinis, Sphingomonas sanguis, strain 13937
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