Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SB4_05660Nitrilotriacetate monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (440 aa)    
Predicted Functional Partners:
SB4_07330
Asp/Glu/hydantoin racemase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.824
SB4_01605
NADPH-dependent FMN reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.811
SB4_06475
FMN reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.804
SB4_08390
NADH oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.801
SB4_05655
Major facilitator transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.799
SB4_12065
NAD(P)H:quinone oxidoreductase; Catalyzes the transfer of electrons from NADH to ubiquinone; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.721
SB4_05665
TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.709
SB4_04325
Arsenic resistance protein ArsH; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.695
SB4_04115
Malonic semialdehyde reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.585
SB4_05650
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.580
Your Current Organism:
Sphingomonas sanguinis
NCBI taxonomy Id: 33051
Other names: 13937T, ATCC 51382, CIP 104197, DSM 13885, GIFU 2397, GIFU:2397, HAMBI 2010, IFO 13937, JCM 7514, LMG 17325, LMG:17325, NBRC 13937, S. sanguinis, Sphingomonas sanguis, strain 13937
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