Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SB4_06805Gluconolaconase; Derived by automated computational analysis using gene prediction method: Protein Homology. (287 aa)    
Predicted Functional Partners:
SB4_06810
3-oxoacyl-ACP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.989
SB4_06825
Dihydroxy-acid dehydratase; Catalyzes the formation of 3-methyl-2-oxobutanoate from 2,3,-dihydroxy-3-methylbutanoate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the IlvD/Edd family.
 
  
  0.948
SB4_06815
Fumarylacetoacetate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.887
SB4_13975
Galactose 1-dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.834
SB4_14895
Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.807
SB4_13985
2-oxo-3-deoxygalactonate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.663
SB4_08995
GMC family oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.610
SB4_05240
Bifunctional D-altronate/D-mannonate dehydratase; Starvation-sensing protein; maybe involved in homoserine lactone degradation; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.567
SB4_12030
Glucose-fructose oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.567
SB4_13980
2-dehydro-3-deoxy-6-phosphogalactonate aldolase; Catalyzes the formation of D-glyceraldehyde 3-phosphate and pyruvate from 2-dehydro-3-deoxy-D-galactonate 6-phosphate; functions in galactonate metabolism; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.543
Your Current Organism:
Sphingomonas sanguinis
NCBI taxonomy Id: 33051
Other names: 13937T, ATCC 51382, CIP 104197, DSM 13885, GIFU 2397, GIFU:2397, HAMBI 2010, IFO 13937, JCM 7514, LMG 17325, LMG:17325, NBRC 13937, S. sanguinis, Sphingomonas sanguis, strain 13937
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.