STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SB4_14865Beta-lactamase; Derived by automated computational analysis using gene prediction method: Protein Homology. (438 aa)    
Predicted Functional Partners:
SB4_14860
NUDIX hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.874
SB4_14870
Adenine glycosylase; Adenine glycosylase active on G-A mispairs.
       0.874
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
     
 0.677
smc
Chromosome segregation protein; Required for chromosome condensation and partitioning. Belongs to the SMC family.
       0.566
SB4_10935
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.566
SB4_10940
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.566
SB4_10945
Protein-disulfide isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.566
SB4_11690
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.563
SB4_12450
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.463
SB4_13220
Peptidoglycan glycosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.462
Your Current Organism:
Sphingomonas sanguinis
NCBI taxonomy Id: 33051
Other names: 13937T, ATCC 51382, CIP 104197, DSM 13885, GIFU 2397, GIFU:2397, HAMBI 2010, IFO 13937, JCM 7514, LMG 17325, LMG:17325, NBRC 13937, S. sanguinis, Sphingomonas sanguis, strain 13937
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