Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SB4_15565DNA primase; Derived by automated computational analysis using gene prediction method: Protein Homology. (356 aa)    
Predicted Functional Partners:
SB4_15570
Methylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     0.962
SB4_15560
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.885
ybeY
rRNA maturation factor; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
  
  
 0.805
SB4_15585
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.786
SB4_06725
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.771
SB4_15115
Type VI secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.760
SB4_15125
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.749
SB4_15130
Peptidase S26; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.743
SB4_15135
Glycosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.737
SB4_06735
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.727
Your Current Organism:
Sphingomonas sanguinis
NCBI taxonomy Id: 33051
Other names: 13937T, ATCC 51382, CIP 104197, DSM 13885, GIFU 2397, GIFU:2397, HAMBI 2010, IFO 13937, JCM 7514, LMG 17325, LMG:17325, NBRC 13937, S. sanguinis, Sphingomonas sanguis, strain 13937
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.