STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SB4_15890Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (486 aa)    
Predicted Functional Partners:
SB4_08725
Cadherin; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.769
SB4_16680
Dolichol monophosphate mannose synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.677
SB4_15885
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.655
SB4_13940
Polysaccharide deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.636
SB4_18610
Terminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.579
SB4_17875
S-formylglutathione hydrolase; Serine hydrolase involved in the detoxification of formaldehyde.
    
  0.550
SB4_01295
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.508
SB4_17295
Polysaccharide deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.504
SB4_13595
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.436
SB4_14045
Polysaccharide deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.436
Your Current Organism:
Sphingomonas sanguinis
NCBI taxonomy Id: 33051
Other names: 13937T, ATCC 51382, CIP 104197, DSM 13885, GIFU 2397, GIFU:2397, HAMBI 2010, IFO 13937, JCM 7514, LMG 17325, LMG:17325, NBRC 13937, S. sanguinis, Sphingomonas sanguis, strain 13937
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.