Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SB4_16715 | SB4_16720 | SB4_16715 | SB4_16720 | LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.419 |
SB4_16715 | apaG | SB4_16715 | SB4_16710 | LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family. | Magnesium transporter ApaG; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.874 |
SB4_16715 | metZ | SB4_16715 | SB4_16705 | LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family. | O-succinylhomoserine sulfhydrylase; Catalyzes the formation of L-homocysteine from O-succinyl-L- homoserine (OSHS) and hydrogen sulfide. | 0.875 |
SB4_16720 | SB4_16715 | SB4_16720 | SB4_16715 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family. | 0.419 |
SB4_16720 | apaG | SB4_16720 | SB4_16710 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Magnesium transporter ApaG; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.419 |
SB4_16720 | metZ | SB4_16720 | SB4_16705 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | O-succinylhomoserine sulfhydrylase; Catalyzes the formation of L-homocysteine from O-succinyl-L- homoserine (OSHS) and hydrogen sulfide. | 0.424 |
SB4_16720 | rplD | SB4_16720 | SB4_10320 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L4; Forms part of the polypeptide exit tunnel. | 0.545 |
apaG | SB4_16715 | SB4_16710 | SB4_16715 | Magnesium transporter ApaG; Derived by automated computational analysis using gene prediction method: Protein Homology. | LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family. | 0.874 |
apaG | SB4_16720 | SB4_16710 | SB4_16720 | Magnesium transporter ApaG; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.419 |
apaG | metZ | SB4_16710 | SB4_16705 | Magnesium transporter ApaG; Derived by automated computational analysis using gene prediction method: Protein Homology. | O-succinylhomoserine sulfhydrylase; Catalyzes the formation of L-homocysteine from O-succinyl-L- homoserine (OSHS) and hydrogen sulfide. | 0.875 |
metZ | SB4_16715 | SB4_16705 | SB4_16715 | O-succinylhomoserine sulfhydrylase; Catalyzes the formation of L-homocysteine from O-succinyl-L- homoserine (OSHS) and hydrogen sulfide. | LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family. | 0.875 |
metZ | SB4_16720 | SB4_16705 | SB4_16720 | O-succinylhomoserine sulfhydrylase; Catalyzes the formation of L-homocysteine from O-succinyl-L- homoserine (OSHS) and hydrogen sulfide. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.424 |
metZ | apaG | SB4_16705 | SB4_16710 | O-succinylhomoserine sulfhydrylase; Catalyzes the formation of L-homocysteine from O-succinyl-L- homoserine (OSHS) and hydrogen sulfide. | Magnesium transporter ApaG; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.875 |
rplD | SB4_16720 | SB4_10320 | SB4_16720 | 50S ribosomal protein L4; Forms part of the polypeptide exit tunnel. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.545 |