Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SB4_18580Trehalase; Derived by automated computational analysis using gene prediction method: Protein Homology. (518 aa)    
Predicted Functional Partners:
SB4_12745
Hypothetical protein; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
 
 0.988
SB4_00810
Malto-oligosyltrehalose trehalohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.944
glk
Glucokinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial glucokinase family.
    
 0.885
SB4_06830
Aldose epimerase; Converts alpha-aldose to the beta-anomer.
     
  0.884
SB4_18585
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
SB4_18590
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.693
tal
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 2 subfamily.
   
  
 0.662
SB4_07990
Aldose epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.593
SB4_05045
Fructokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.578
SB4_05720
Catalase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.570
Your Current Organism:
Sphingomonas sanguinis
NCBI taxonomy Id: 33051
Other names: 13937T, ATCC 51382, CIP 104197, DSM 13885, GIFU 2397, GIFU:2397, HAMBI 2010, IFO 13937, JCM 7514, LMG 17325, LMG:17325, NBRC 13937, S. sanguinis, Sphingomonas sanguis, strain 13937
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