STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001556165_02523Unannotated protein. (122 aa)    
Predicted Functional Partners:
GCA_001556165_00272
Unannotated protein.
 
 0.999
GCA_001556165_00342
Unannotated protein.
 
 0.999
GCA_001556165_01296
Unannotated protein.
  
 0.999
GCA_001556165_01310
Unannotated protein.
   
 0.999
GCA_001556165_01311
Unannotated protein.
  
 0.999
GCA_001556165_01525
Unannotated protein.
   
 0.999
GCA_001556165_02226
Unannotated protein.
 
 0.999
GCA_001556165_02295
Unannotated protein.
 
 0.999
rpsL
Unannotated protein; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.
 
 0.999
GCA_001556165_02494
Unannotated protein.
 
 0.999
Your Current Organism:
Neisseria perflava
NCBI taxonomy Id: 33053
Other names: ATCC 10555, CCUG 17915, LMG 5284, LMG:5284, N. perflava
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.