STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001556165_03500Unannotated protein. (152 aa)    
Predicted Functional Partners:
GCA_001556165_00380
Unannotated protein.
    
 0.924
GCA_001556165_02525
Unannotated protein.
   
   0.898
GCA_001556165_03499
Unannotated protein.
 
     0.755
GCA_001556165_02436
Unannotated protein.
  
  
 0.738
GCA_001556165_01973
Unannotated protein.
   
   0.665
GCA_001556165_01972
Unannotated protein.
   
   0.664
GCA_001556165_02884
Unannotated protein.
   
   0.658
GCA_001556165_00021
Unannotated protein.
  
 
 0.643
GCA_001556165_01037
Unannotated protein.
  
   
 0.530
GCA_001556165_02180
Unannotated protein.
   
 
 0.529
Your Current Organism:
Neisseria perflava
NCBI taxonomy Id: 33053
Other names: ATCC 10555, CCUG 17915, LMG 5284, LMG:5284, N. perflava
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.