STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CNE06231.1Rhs element Vgr protein. (850 aa)    
Predicted Functional Partners:
CNE06202.1
Putative lipoprotein.
 
  
 0.963
CNE06170.1
Type VI secretion protein.
 
  
 0.962
vasA-2
Type VI secretion protein.
 
  
 0.949
CNE06102.1
ImpA domain-containing protein.
 
  
 0.923
CNE06068.1
ImcF domain-containing protein.
 
  
 0.922
TssB-2
Type VI secretion protein.
 
  
 0.911
TssB
Type VI secretion protein.
 
  
 0.892
psaB
Putative OmpA family protein.
 
  
 0.890
TssB-3
Type VI secretion protein.
 
  
 0.885
hcp3
Hemolysin-coregulated protein.
 
  
 0.881
Your Current Organism:
Yersinia mollaretii
NCBI taxonomy Id: 33060
Other names: ATCC 43969, CCUG 26331, CDC 2465-87, CIP 103324, CNY 7263, Y. mollaretii, Yersinia enterocolitica biogroup 3A, strain WAIP 204
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.