STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fliA_1Flagellar biosynthesis sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes; Belongs to the sigma-70 factor family. FliA subfamily. (240 aa)    
Predicted Functional Partners:
flgM
Anti-sigma-28 factor FlgM.
 
 0.993
flgM-2
Anti-sigma-28 factor FlgM.
  
 0.989
flgB_1
Flagellar basal body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
 
 
 0.951
fliZ
Flagella biosynthesis protein FliZ.
  
  
 0.950
flgC_2
Flagellar basal body rod protein FlgC; Belongs to the flagella basal body rod proteins family.
 
 
 0.945
flgC_1
Flagellar basal body rod protein FlgC; Belongs to the flagella basal body rod proteins family.
 
 
 0.944
flgB_2
Flagellar basal body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
 
 
 0.934
flgK_1
Flagellar hook-associated protein FlgK.
 
  
 0.930
flgE_1
Flagellar hook protein FlgE.
 
  
 0.926
flgK_2
Flagellar hook-associated protein FlgK.
 
  
 0.925
Your Current Organism:
Yersinia mollaretii
NCBI taxonomy Id: 33060
Other names: ATCC 43969, CCUG 26331, CDC 2465-87, CIP 103324, CNY 7263, Y. mollaretii, Yersinia enterocolitica biogroup 3A, strain WAIP 204
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