Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CNF06791.1 | rcsC_2 | ERS008532_02904 | ERS008532_02903 | Large exoproteins involved in heme utilization or adhesion. | Putative accessory processing protein. | 0.671 |
CNF06791.1 | togN | ERS008532_02904 | ERS008532_01697 | Large exoproteins involved in heme utilization or adhesion. | Inner membrane permease of oligogalacturonide ABC transporter. | 0.454 |
CNF06791.1 | ugpE | ERS008532_02904 | ERS008532_03560 | Large exoproteins involved in heme utilization or adhesion. | Glycerol-3-phosphate transporter membrane protein; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane. | 0.454 |
rcsC_2 | CNF06791.1 | ERS008532_02903 | ERS008532_02904 | Putative accessory processing protein. | Large exoproteins involved in heme utilization or adhesion. | 0.671 |
togN | CNF06791.1 | ERS008532_01697 | ERS008532_02904 | Inner membrane permease of oligogalacturonide ABC transporter. | Large exoproteins involved in heme utilization or adhesion. | 0.454 |
ugpE | CNF06791.1 | ERS008532_03560 | ERS008532_02904 | Glycerol-3-phosphate transporter membrane protein; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane. | Large exoproteins involved in heme utilization or adhesion. | 0.454 |