STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yjbJPutative stress-response protein; Belongs to the UPF0337 (CsbD) family. (69 aa)    
Predicted Functional Partners:
osmY_3
Putative lipoprotein.
 
  
 0.914
CNE37674.1
Small integral membrane protein.
 
  
 0.899
osmY_2
Osmotically inducible protein OsmY.
 
  
 0.876
ygdR
Lipoprotein.
   
    0.854
osmY_1
Hemolysin.
 
  
 0.804
elaB_2
Putative inner membrane protein.
 
  
 0.676
kpsD
Polysialic acid transport protein kpsD precursor.
   
    0.626
CNF38369.1
Cell division inhibitor.
   
    0.619
yiaH
Inner membrane protein YiaH; Responsible for the incorporation of O-acetyl groups into the enterobacterial common antigen (ECA) trisaccharide repeat units.
   
    0.576
CNE91890.1
Vi polysaccharide export inner membrane protein VexD.
   
    0.576
Your Current Organism:
Yersinia mollaretii
NCBI taxonomy Id: 33060
Other names: ATCC 43969, CCUG 26331, CDC 2465-87, CIP 103324, CNY 7263, Y. mollaretii, Yersinia enterocolitica biogroup 3A, strain WAIP 204
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.