STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKO52494.1General secretion pathway protein GspM; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins. (178 aa)    
Predicted Functional Partners:
AKO52493.1
General secretion pathway protein GspL; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
 
 
 0.995
AKO52490.1
General secretion pathway protein GspI; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.959
AKO52491.1
General secretion pathway protein GspJ; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.959
AKO52489.1
General secretion pathway protein GspH; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.957
AKO52492.1
General secretion pathway protein GspK; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.948
AKO52485.1
General secretion pathway protein GspC; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.903
AKO52488.1
Secretion system protein G; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.885
AKO51780.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.732
AKO52487.1
General secretion pathway protein GspF; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.724
AKO52486.1
General secretion pathway protein GspE; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
 
  
 0.714
Your Current Organism:
Marinobacter psychrophilus
NCBI taxonomy Id: 330734
Other names: CGMCC 1.6499, JCM 14643, M. psychrophilus, Marinobacter psychrophilus Zhang et al. 2008, Marinobacter sp. BSi20041, strain 20041
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.