Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Saci_0014 | Saci_0015 | Saci_0014 | Saci_0015 | Conserved membrane protein. | Endonuclease IV. | 0.566 |
Saci_0014 | Saci_0016 | Saci_0014 | Saci_0016 | Conserved membrane protein. | Conserved protein. | 0.566 |
Saci_0014 | nudF | Saci_0014 | Saci_0013 | Conserved membrane protein. | ADP-ribose pyrophosphatase. | 0.835 |
Saci_0015 | Saci_0014 | Saci_0015 | Saci_0014 | Endonuclease IV. | Conserved membrane protein. | 0.566 |
Saci_0015 | Saci_0016 | Saci_0015 | Saci_0016 | Endonuclease IV. | Conserved protein. | 0.828 |
Saci_0015 | nudF | Saci_0015 | Saci_0013 | Endonuclease IV. | ADP-ribose pyrophosphatase. | 0.658 |
Saci_0016 | Saci_0014 | Saci_0016 | Saci_0014 | Conserved protein. | Conserved membrane protein. | 0.566 |
Saci_0016 | Saci_0015 | Saci_0016 | Saci_0015 | Conserved protein. | Endonuclease IV. | 0.828 |
Saci_0016 | nudF | Saci_0016 | Saci_0013 | Conserved protein. | ADP-ribose pyrophosphatase. | 0.568 |
nudF | Saci_0014 | Saci_0013 | Saci_0014 | ADP-ribose pyrophosphatase. | Conserved membrane protein. | 0.835 |
nudF | Saci_0015 | Saci_0013 | Saci_0015 | ADP-ribose pyrophosphatase. | Endonuclease IV. | 0.658 |
nudF | Saci_0016 | Saci_0013 | Saci_0016 | ADP-ribose pyrophosphatase. | Conserved protein. | 0.568 |