Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Saci_0210 | Saci_0211 | Saci_0210 | Saci_0211 | Conserved protein. | Conserved protein. | 0.684 |
Saci_0210 | Saci_0212 | Saci_0210 | Saci_0212 | Conserved protein. | CBS domain protein; 4 domains were found. | 0.680 |
Saci_0210 | Saci_0213 | Saci_0210 | Saci_0213 | Conserved protein. | Histone deacetylase. | 0.501 |
Saci_0210 | korA | Saci_0210 | Saci_0209 | Conserved protein. | 2-oxoacid-ferredoxin oxidoreductase, alfa domain; N-terminal domain of unknown function (seen in all archaea). | 0.497 |
Saci_0210 | korB | Saci_0210 | Saci_0208 | Conserved protein. | 2-oxoglutarate synthase subunit B. | 0.497 |
Saci_0211 | Saci_0210 | Saci_0211 | Saci_0210 | Conserved protein. | Conserved protein. | 0.684 |
Saci_0211 | Saci_0212 | Saci_0211 | Saci_0212 | Conserved protein. | CBS domain protein; 4 domains were found. | 0.871 |
Saci_0211 | Saci_0213 | Saci_0211 | Saci_0213 | Conserved protein. | Histone deacetylase. | 0.622 |
Saci_0211 | korA | Saci_0211 | Saci_0209 | Conserved protein. | 2-oxoacid-ferredoxin oxidoreductase, alfa domain; N-terminal domain of unknown function (seen in all archaea). | 0.456 |
Saci_0211 | korB | Saci_0211 | Saci_0208 | Conserved protein. | 2-oxoglutarate synthase subunit B. | 0.476 |
Saci_0212 | Saci_0210 | Saci_0212 | Saci_0210 | CBS domain protein; 4 domains were found. | Conserved protein. | 0.680 |
Saci_0212 | Saci_0211 | Saci_0212 | Saci_0211 | CBS domain protein; 4 domains were found. | Conserved protein. | 0.871 |
Saci_0212 | Saci_0213 | Saci_0212 | Saci_0213 | CBS domain protein; 4 domains were found. | Histone deacetylase. | 0.633 |
Saci_0212 | korA | Saci_0212 | Saci_0209 | CBS domain protein; 4 domains were found. | 2-oxoacid-ferredoxin oxidoreductase, alfa domain; N-terminal domain of unknown function (seen in all archaea). | 0.447 |
Saci_0212 | korB | Saci_0212 | Saci_0208 | CBS domain protein; 4 domains were found. | 2-oxoglutarate synthase subunit B. | 0.459 |
Saci_0213 | Saci_0210 | Saci_0213 | Saci_0210 | Histone deacetylase. | Conserved protein. | 0.501 |
Saci_0213 | Saci_0211 | Saci_0213 | Saci_0211 | Histone deacetylase. | Conserved protein. | 0.622 |
Saci_0213 | Saci_0212 | Saci_0213 | Saci_0212 | Histone deacetylase. | CBS domain protein; 4 domains were found. | 0.633 |
korA | Saci_0210 | Saci_0209 | Saci_0210 | 2-oxoacid-ferredoxin oxidoreductase, alfa domain; N-terminal domain of unknown function (seen in all archaea). | Conserved protein. | 0.497 |
korA | Saci_0211 | Saci_0209 | Saci_0211 | 2-oxoacid-ferredoxin oxidoreductase, alfa domain; N-terminal domain of unknown function (seen in all archaea). | Conserved protein. | 0.456 |
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