Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Saci_0307 | Saci_0308 | Saci_0307 | Saci_0308 | Biotin/lipoate A/B protein ligase family protein. | Conserved protein. | 0.572 |
Saci_0307 | Saci_0310 | Saci_0307 | Saci_0310 | Biotin/lipoate A/B protein ligase family protein. | Biotin/lipoate A/B protein ligase family protein. | 0.656 |
Saci_0307 | gcs2 | Saci_0307 | Saci_0350 | Biotin/lipoate A/B protein ligase family protein. | Glycine cleavage H-protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | 0.650 |
Saci_0307 | gcs3 | Saci_0307 | Saci_0349 | Biotin/lipoate A/B protein ligase family protein. | Glycine cleavage H-protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | 0.651 |
Saci_0307 | gcvH | Saci_0307 | Saci_1384 | Biotin/lipoate A/B protein ligase family protein. | Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | 0.598 |
Saci_0307 | lipA | Saci_0307 | Saci_0309 | Biotin/lipoate A/B protein ligase family protein. | Lipoic acid synthetase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives. | 0.967 |
Saci_0307 | lpdV | Saci_0307 | Saci_0136 | Biotin/lipoate A/B protein ligase family protein. | Dihydrolipoamide dehydrogenase; Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family. | 0.753 |
Saci_0307 | pdhD | Saci_0307 | Saci_0338 | Biotin/lipoate A/B protein ligase family protein. | Dihydrolipoamide dehydrogenase; Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family. | 0.760 |
Saci_0308 | Saci_0307 | Saci_0308 | Saci_0307 | Conserved protein. | Biotin/lipoate A/B protein ligase family protein. | 0.572 |
Saci_0308 | Saci_0310 | Saci_0308 | Saci_0310 | Conserved protein. | Biotin/lipoate A/B protein ligase family protein. | 0.779 |
Saci_0308 | lipA | Saci_0308 | Saci_0309 | Conserved protein. | Lipoic acid synthetase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives. | 0.826 |
Saci_0310 | Saci_0307 | Saci_0310 | Saci_0307 | Biotin/lipoate A/B protein ligase family protein. | Biotin/lipoate A/B protein ligase family protein. | 0.656 |
Saci_0310 | Saci_0308 | Saci_0310 | Saci_0308 | Biotin/lipoate A/B protein ligase family protein. | Conserved protein. | 0.779 |
Saci_0310 | Saci_0351 | Saci_0310 | Saci_0351 | Biotin/lipoate A/B protein ligase family protein. | Biotin/lipoate A/B protein ligase. | 0.727 |
Saci_0310 | gcs2 | Saci_0310 | Saci_0350 | Biotin/lipoate A/B protein ligase family protein. | Glycine cleavage H-protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | 0.651 |
Saci_0310 | gcs3 | Saci_0310 | Saci_0349 | Biotin/lipoate A/B protein ligase family protein. | Glycine cleavage H-protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | 0.598 |
Saci_0310 | gcvH | Saci_0310 | Saci_1384 | Biotin/lipoate A/B protein ligase family protein. | Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | 0.598 |
Saci_0310 | lipA | Saci_0310 | Saci_0309 | Biotin/lipoate A/B protein ligase family protein. | Lipoic acid synthetase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives. | 0.983 |
Saci_0310 | lpdV | Saci_0310 | Saci_0136 | Biotin/lipoate A/B protein ligase family protein. | Dihydrolipoamide dehydrogenase; Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family. | 0.711 |
Saci_0310 | pdhD | Saci_0310 | Saci_0338 | Biotin/lipoate A/B protein ligase family protein. | Dihydrolipoamide dehydrogenase; Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family. | 0.710 |
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