STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hdrAHeterodisulfide reductase A. (364 aa)    
Predicted Functional Partners:
hdrB
Heterodisulfide reductase B.
 
 0.999
Saci_0329
Conserved protein.
 
 0.999
hdrC
Metabolism heterodisulfide reductase C.
 
 0.999
Saci_0326
4Fe-4S binding domain protein.
 
 0.998
sdhC
Succinate dehydrogenase subunit C.
 
 
 0.983
Saci_0327
Conserved protein.
 
     0.928
etfA
Electron transfer flavoprotein.
     
 0.769
pccB
propionyl-CoA carboxylase beta chain.
     
 0.734
ctaB
Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
     
 0.731
Saci_0344
Radical SAM domain protein.
 
     0.718
Your Current Organism:
Sulfolobus acidocaldarius DSM 639
NCBI taxonomy Id: 330779
Other names: S. acidocaldarius DSM 639, Sulfolobus acidocaldarius ATCC 33909, Sulfolobus acidocaldarius NCIB 11770
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.