STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Saci_0504C-terminal of inactivated transposase (ISC1476-like). (331 aa)    
Predicted Functional Partners:
Saci_2133
Conserved membrane protein.
 
     0.680
Saci_0503
N-terminal of inactivated transposase (ISC1476-like).
       0.642
flaJ
Flagella-related protein J.
  
     0.627
Saci_1183
Conserved Archaeal membrane protein; Contains a repeated motif.
  
     0.617
Saci_2068
Hypothetical protein; Similar to gi:15898613.
 
     0.575
Saci_1760
Conserved Archaeal membrane protein.
 
   
 0.561
Saci_0295
Conserved membrane protein.
 
     0.542
Saci_2151
Conserved membrane protein.
 
     0.542
Saci_1387
Conserved Archaeal protein.
 
     0.528
Saci_2296
Conserved Archaeal HTH DNA-binding domain protein.
  
     0.528
Your Current Organism:
Sulfolobus acidocaldarius DSM 639
NCBI taxonomy Id: 330779
Other names: S. acidocaldarius DSM 639, Sulfolobus acidocaldarius ATCC 33909, Sulfolobus acidocaldarius NCIB 11770
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.