Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Saci_0713 | Saci_1137 | Saci_0713 | Saci_1137 | Threonine dehydratase. | Thiamine pyrophosphate enzyme; Belongs to the TPP enzyme family. | 0.941 |
Saci_0713 | Saci_1561 | Saci_0713 | Saci_1561 | Threonine dehydratase. | Acetolactate synthase large subunit. | 0.941 |
Saci_0713 | ilvC | Saci_0713 | Saci_1559 | Threonine dehydratase. | Ketol-acid reductoisomerase; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate. | 0.875 |
Saci_0713 | ilvD | Saci_0713 | Saci_1715 | Threonine dehydratase. | Dihydroxyacid dehydratase/phosphogluconate dehydratase; Belongs to the IlvD/Edd family. | 0.948 |
Saci_0713 | leu2 | Saci_0713 | Saci_0253 | Threonine dehydratase. | 3-isopropylmalate dehydratase large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. | 0.780 |
Saci_0713 | leuB | Saci_0713 | Saci_0600 | Threonine dehydratase. | 3-isopropylmalate dehydrogenase. | 0.976 |
Saci_0713 | leuD | Saci_0713 | Saci_0252 | Threonine dehydratase. | 3-isopropylmalate dehydratase small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 2 subfamily. | 0.809 |
Saci_0713 | trpA | Saci_0713 | Saci_1422 | Threonine dehydratase. | Tryptophan synthase alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.940 |
Saci_1137 | Saci_0713 | Saci_1137 | Saci_0713 | Thiamine pyrophosphate enzyme; Belongs to the TPP enzyme family. | Threonine dehydratase. | 0.941 |
Saci_1137 | Saci_1561 | Saci_1137 | Saci_1561 | Thiamine pyrophosphate enzyme; Belongs to the TPP enzyme family. | Acetolactate synthase large subunit. | 0.917 |
Saci_1137 | ilvC | Saci_1137 | Saci_1559 | Thiamine pyrophosphate enzyme; Belongs to the TPP enzyme family. | Ketol-acid reductoisomerase; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate. | 0.974 |
Saci_1137 | ilvD | Saci_1137 | Saci_1715 | Thiamine pyrophosphate enzyme; Belongs to the TPP enzyme family. | Dihydroxyacid dehydratase/phosphogluconate dehydratase; Belongs to the IlvD/Edd family. | 0.761 |
Saci_1137 | leu2 | Saci_1137 | Saci_0253 | Thiamine pyrophosphate enzyme; Belongs to the TPP enzyme family. | 3-isopropylmalate dehydratase large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. | 0.589 |
Saci_1137 | leuB | Saci_1137 | Saci_0600 | Thiamine pyrophosphate enzyme; Belongs to the TPP enzyme family. | 3-isopropylmalate dehydrogenase. | 0.954 |
Saci_1137 | leuD | Saci_1137 | Saci_0252 | Thiamine pyrophosphate enzyme; Belongs to the TPP enzyme family. | 3-isopropylmalate dehydratase small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 2 subfamily. | 0.592 |
Saci_1561 | Saci_0713 | Saci_1561 | Saci_0713 | Acetolactate synthase large subunit. | Threonine dehydratase. | 0.941 |
Saci_1561 | Saci_1137 | Saci_1561 | Saci_1137 | Acetolactate synthase large subunit. | Thiamine pyrophosphate enzyme; Belongs to the TPP enzyme family. | 0.917 |
Saci_1561 | ilvC | Saci_1561 | Saci_1559 | Acetolactate synthase large subunit. | Ketol-acid reductoisomerase; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate. | 0.995 |
Saci_1561 | ilvD | Saci_1561 | Saci_1715 | Acetolactate synthase large subunit. | Dihydroxyacid dehydratase/phosphogluconate dehydratase; Belongs to the IlvD/Edd family. | 0.876 |
Saci_1561 | leu2 | Saci_1561 | Saci_0253 | Acetolactate synthase large subunit. | 3-isopropylmalate dehydratase large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. | 0.581 |
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