STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Saci_0797Conserved Archaeal protein. (605 aa)    
Predicted Functional Partners:
Saci_0796
Conserved Archaeal protein; Matching: PF01163 - family of proteins are related to eukaryotic type protein kinases.
 
     0.899
Saci_0795
Conserved Prokaryal protein; Similar to gi:15920412 and gi:15897146.
 
     0.745
Saci_0658
Conserved Archaeal protein.
  
     0.674
tfe
Conserved Archaeal protein; Transcription factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Facilitates transcription initiation by enhancing TATA-box recognition by TATA-box-binding protein (Tbp), and transcription factor B (Tfb) and RNA polymerase recruitment. Not absolutely required for transcription in vitro, but particularly important in cases where Tbp or Tfb function is not optimal. It dynamically alters the nucleic acid-binding properties of RNA polymerases by stabilizing the initiation complex and destabilizing elongation complexes. Se [...]
  
     0.601
Saci_0793
Conserved Archaeal protein.
 
     0.590
Saci_0542
Conserved Archaeal DHH-related protein.
  
     0.587
Saci_0950
Conserved Archaeal protein.
  
     0.582
Saci_0718
Conserved Archaeal protein.
  
     0.564
Saci_0792
Conserved Archaeal protein.
       0.525
Saci_1344
Conserved Archaeal HTH-domain protein.
 
     0.525
Your Current Organism:
Sulfolobus acidocaldarius DSM 639
NCBI taxonomy Id: 330779
Other names: S. acidocaldarius DSM 639, Sulfolobus acidocaldarius ATCC 33909, Sulfolobus acidocaldarius NCIB 11770
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.