STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Saci_1010Conserved Archaeal protein; PF01472: Pseudouridine synthase and Archaeosinetransglycosylase. (162 aa)    
Predicted Functional Partners:
Saci_1009
Carbon monoxide dehydrogenase; PF02738 Aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding domain; sp:Q46799 Xanthine dehydrogenase, molybdenum binding subunit (EC1.1.1.204).
       0.839
Saci_1011
Glycosyl transferase.
       0.816
rps4e
30S ribosomal protein S4E; Belongs to the eukaryotic ribosomal protein eS4 family.
    
   0.779
rps3ae
30S ribosomal protein S3AE; Belongs to the eukaryotic ribosomal protein eS1 family.
  
 
   0.778
rps3
30S ribosomal protein S3P; Binds the lower part of the 30S subunit head. Belongs to the universal ribosomal protein uS3 family.
    
 
 0.771
rps19e
30S ribosomal protein S19E; May be involved in maturation of the 30S ribosomal subunit. Belongs to the eukaryotic ribosomal protein eS19 family.
 
 
   0.771
rps28e
30S ribosomal protein S28E; Belongs to the eukaryotic ribosomal protein eS28 family.
  
 
   0.764
Saci_0841
30S ribosomal protein S25E; Only found in Crenarchaea and Eukarya.
    
 
 0.747
rps10
30S ribosomal protein S10P; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.
  
 
   0.744
rps19
30S ribosomal protein S19P; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.
    
   0.735
Your Current Organism:
Sulfolobus acidocaldarius DSM 639
NCBI taxonomy Id: 330779
Other names: S. acidocaldarius DSM 639, Sulfolobus acidocaldarius ATCC 33909, Sulfolobus acidocaldarius NCIB 11770
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.