Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Saci_0074 | dpo1 | Saci_0074 | Saci_1537 | DNA polymerase B3. | DNA polymerase I; This polymerase possesses two enzymatic activities: DNA synthesis (polymerase) and an exonucleolytic activity that degrades single-stranded DNA in the 3'- to 5'-direction. | 0.950 |
Saci_0074 | ogg | Saci_0074 | Saci_1367 | DNA polymerase B3. | N-glycosylase/DNA lyase; Responsible for removing an oxidatively damaged form of guanine (7,8-dihydro-8-oxoguanine = 7-oxoG) from DNA. Also nicks DNA at apurinic/apyrimidinic sites (AP sites); Belongs to the type-2 OGG1 family. | 0.733 |
Saci_0074 | polIV | Saci_0074 | Saci_0554 | DNA polymerase B3. | DNA polymerase IV; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis. | 0.987 |
Saci_0074 | pyrE | Saci_0074 | Saci_1597 | DNA polymerase B3. | Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.569 |
Saci_0074 | top1 | Saci_0074 | Saci_1371 | DNA polymerase B3. | DNA topoisomerase I family A. | 0.589 |
Saci_1366 | Saci_1368 | Saci_1366 | Saci_1368 | Conserved protein. | D-isomer specific 2-hydroxyacid dehydrogenase. | 0.469 |
Saci_1366 | ogg | Saci_1366 | Saci_1367 | Conserved protein. | N-glycosylase/DNA lyase; Responsible for removing an oxidatively damaged form of guanine (7,8-dihydro-8-oxoguanine = 7-oxoG) from DNA. Also nicks DNA at apurinic/apyrimidinic sites (AP sites); Belongs to the type-2 OGG1 family. | 0.848 |
Saci_1366 | sgaA | Saci_1366 | Saci_1369 | Conserved protein. | Serine-glyoxylate aminotransferase. | 0.470 |
Saci_1366 | top1 | Saci_1366 | Saci_1371 | Conserved protein. | DNA topoisomerase I family A. | 0.411 |
Saci_1368 | Saci_1366 | Saci_1368 | Saci_1366 | D-isomer specific 2-hydroxyacid dehydrogenase. | Conserved protein. | 0.469 |
Saci_1368 | ogg | Saci_1368 | Saci_1367 | D-isomer specific 2-hydroxyacid dehydrogenase. | N-glycosylase/DNA lyase; Responsible for removing an oxidatively damaged form of guanine (7,8-dihydro-8-oxoguanine = 7-oxoG) from DNA. Also nicks DNA at apurinic/apyrimidinic sites (AP sites); Belongs to the type-2 OGG1 family. | 0.474 |
Saci_1368 | sgaA | Saci_1368 | Saci_1369 | D-isomer specific 2-hydroxyacid dehydrogenase. | Serine-glyoxylate aminotransferase. | 0.901 |
Saci_1368 | top1 | Saci_1368 | Saci_1371 | D-isomer specific 2-hydroxyacid dehydrogenase. | DNA topoisomerase I family A. | 0.746 |
Saci_2177 | ogg | Saci_2177 | Saci_1367 | Conserved Archaeal protein. | N-glycosylase/DNA lyase; Responsible for removing an oxidatively damaged form of guanine (7,8-dihydro-8-oxoguanine = 7-oxoG) from DNA. Also nicks DNA at apurinic/apyrimidinic sites (AP sites); Belongs to the type-2 OGG1 family. | 0.456 |
dpo1 | Saci_0074 | Saci_1537 | Saci_0074 | DNA polymerase I; This polymerase possesses two enzymatic activities: DNA synthesis (polymerase) and an exonucleolytic activity that degrades single-stranded DNA in the 3'- to 5'-direction. | DNA polymerase B3. | 0.950 |
dpo1 | ogg | Saci_1537 | Saci_1367 | DNA polymerase I; This polymerase possesses two enzymatic activities: DNA synthesis (polymerase) and an exonucleolytic activity that degrades single-stranded DNA in the 3'- to 5'-direction. | N-glycosylase/DNA lyase; Responsible for removing an oxidatively damaged form of guanine (7,8-dihydro-8-oxoguanine = 7-oxoG) from DNA. Also nicks DNA at apurinic/apyrimidinic sites (AP sites); Belongs to the type-2 OGG1 family. | 0.681 |
dpo1 | polIV | Saci_1537 | Saci_0554 | DNA polymerase I; This polymerase possesses two enzymatic activities: DNA synthesis (polymerase) and an exonucleolytic activity that degrades single-stranded DNA in the 3'- to 5'-direction. | DNA polymerase IV; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis. | 0.988 |
dpo1 | top1 | Saci_1537 | Saci_1371 | DNA polymerase I; This polymerase possesses two enzymatic activities: DNA synthesis (polymerase) and an exonucleolytic activity that degrades single-stranded DNA in the 3'- to 5'-direction. | DNA topoisomerase I family A. | 0.516 |
ogg | Saci_0074 | Saci_1367 | Saci_0074 | N-glycosylase/DNA lyase; Responsible for removing an oxidatively damaged form of guanine (7,8-dihydro-8-oxoguanine = 7-oxoG) from DNA. Also nicks DNA at apurinic/apyrimidinic sites (AP sites); Belongs to the type-2 OGG1 family. | DNA polymerase B3. | 0.733 |
ogg | Saci_1366 | Saci_1367 | Saci_1366 | N-glycosylase/DNA lyase; Responsible for removing an oxidatively damaged form of guanine (7,8-dihydro-8-oxoguanine = 7-oxoG) from DNA. Also nicks DNA at apurinic/apyrimidinic sites (AP sites); Belongs to the type-2 OGG1 family. | Conserved protein. | 0.848 |
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