STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Saci_1762Binding-protein-dependent transporter. (352 aa)    
Predicted Functional Partners:
appC
Oligopeptide transport system permease protein.
 
 0.998
Saci_1764
ABC transporter.
 
 0.998
Saci_1765
ABC transporter.
 
 0.997
Saci_1035
ABC transporter.
 
 0.993
Saci_1036
Peptide transport system permease protein.
 
 0.993
Saci_1034
ABC transporter.
 
 0.985
Saci_1038
Universally conserved protein; Contains serveral domains, might be a hybrid protein.
 
 0.980
Saci_1037
Peptide transport system permease protein.
  
  
 
0.922
Saci_1766
Membrane protein; Similar to gi:15920929.
       0.797
Saci_1760
Conserved Archaeal membrane protein.
  
 
 0.768
Your Current Organism:
Sulfolobus acidocaldarius DSM 639
NCBI taxonomy Id: 330779
Other names: S. acidocaldarius DSM 639, Sulfolobus acidocaldarius ATCC 33909, Sulfolobus acidocaldarius NCIB 11770
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.