Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cysHPhosphoadenosine phosphosulfate reductase. (211 aa)    
Predicted Functional Partners:
sir
Sulfite reductase.
  
 
 0.992
Saci_2198
Sulfurtransferase.
 
  
 0.960
Saci_2202
5'-adenylylsulfate sulfotransferase 3.
  
  
  0.921
sat
Sulfate adenylyltransferase.
  
  
 0.890
cysT
Sulfate transport system permease.
  
  
 0.727
Saci_0914
uroporphyrin-III C-methyltransferase; Belongs to the precorrin methyltransferase family.
  
  
 0.617
uroM
uroporphyrin-III C-methyltransferase; Similar to sp:P36150.
  
  
 0.617
Saci_0776
Conserved Archaeal protein.
 
  
 0.588
cysM
Cysteine synthase B.
  
  
 0.576
Saci_2197
Conserved protein; Identification based on homology with Sulfolobus solfataricus and Sulfolobus tokodaii.
     
 0.545
Your Current Organism:
Sulfolobus acidocaldarius DSM 639
NCBI taxonomy Id: 330779
Other names: S. acidocaldarius DSM 639, Sulfolobus acidocaldarius ATCC 33909, Sulfolobus acidocaldarius NCIB 11770
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