STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Saci_1964Hypothetical protein; Similar to gi:15899881. (86 aa)    
Predicted Functional Partners:
Saci_1050
Conserved protein.
     
 0.733
Saci_0028
Conserved protein.
      
 0.732
Saci_2166
Hypothetical protein.
      
 0.732
Saci_1674
Gluconolactonase; Belongs to the SMP-30/CGR1 family.
      
 0.480
Saci_1700
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
      
 0.478
Saci_2137
class-III aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
      
 0.477
Saci_1963
Conserved Archaeal Rieske-type (2Fe-2S) protein.
       0.463
Your Current Organism:
Sulfolobus acidocaldarius DSM 639
NCBI taxonomy Id: 330779
Other names: S. acidocaldarius DSM 639, Sulfolobus acidocaldarius ATCC 33909, Sulfolobus acidocaldarius NCIB 11770
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.