STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Saci_2116Conserved Archaeal HTH DNA binding domain protein. (230 aa)    
Predicted Functional Partners:
Saci_2122
Similar to bacterial proteins of unknown function.
      
 0.731
Saci_0455
Conserved HTH domain protein.
  
     0.723
Saci_2183
Conserved Archaeal protein.
  
     0.716
Saci_2167
Conserved Archaeal HTH DNA binding domain protein.
  
     0.684
Saci_1760
Conserved Archaeal membrane protein.
  
   
 0.563
Saci_1387
Conserved Archaeal protein.
  
     0.488
Saci_1471
Conserved Archaeal protein.
  
     0.466
Saci_2068
Hypothetical protein; Similar to gi:15898613.
  
     0.460
aroK
Shikimate kinase.
  
     0.457
zfx
Zinc-containing ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.
  
     0.453
Your Current Organism:
Sulfolobus acidocaldarius DSM 639
NCBI taxonomy Id: 330779
Other names: S. acidocaldarius DSM 639, Sulfolobus acidocaldarius ATCC 33909, Sulfolobus acidocaldarius NCIB 11770
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.