STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Saci_2125Conserved Crenarchaeal protein. (124 aa)    
Predicted Functional Partners:
adh-6
Conserved NAD-dependent alcohol dehydrogenase.
       0.784
Saci_2124
Amidohydrolase family.
  
    0.755
Saci_1070
Conserved Prokaryal protein.
  
  
 0.518
Saci_1085
Conserved Prokaryal protein.
  
  
 0.518
Saci_1770
Phenylacetic acid catabolic protein.
  
  
 0.517
Saci_1771
Phenylacetic acid catabolic protein.
  
  
 0.517
Saci_0952
Molybdenum cofactor biosynthesis protein D/E; Fusion protein that seems to be a joining of subunit D and E (sp:Q9V2A7) (COG:Ta0895 and COG:AF2179).
     
 0.514
Saci_2127
Transporter.
       0.440
sufS
Selenocysteine lyase.
  
  
 0.400
Your Current Organism:
Sulfolobus acidocaldarius DSM 639
NCBI taxonomy Id: 330779
Other names: S. acidocaldarius DSM 639, Sulfolobus acidocaldarius ATCC 33909, Sulfolobus acidocaldarius NCIB 11770
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.