Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Saci_0315 | Saci_2217 | Saci_0315 | Saci_2217 | Electron transfer flavoprotein; Looks like a hybrid protein, since it contains both the alpha and the beta domain. | acyl-CoA dehydrogenase. | 0.886 |
Saci_0315 | Saci_2218 | Saci_0315 | Saci_2218 | Electron transfer flavoprotein; Looks like a hybrid protein, since it contains both the alpha and the beta domain. | Conserved 3-hydroxybutyryl-CoA. | 0.511 |
Saci_0315 | Saci_2342 | Saci_0315 | Saci_2342 | Electron transfer flavoprotein; Looks like a hybrid protein, since it contains both the alpha and the beta domain. | NADH-quinone oxidoreductase. | 0.508 |
Saci_0315 | etfB | Saci_0315 | Saci_0290 | Electron transfer flavoprotein; Looks like a hybrid protein, since it contains both the alpha and the beta domain. | Electron transfer flavoprotein; Could be both subunits. | 0.996 |
Saci_0315 | paaF | Saci_0315 | Saci_1633 | Electron transfer flavoprotein; Looks like a hybrid protein, since it contains both the alpha and the beta domain. | 3-hydroxybutyryl-CoA dehydratase; Several copies; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.407 |
Saci_0315 | paaF-3 | Saci_0315 | Saci_2286 | Electron transfer flavoprotein; Looks like a hybrid protein, since it contains both the alpha and the beta domain. | enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.405 |
Saci_2063 | Saci_2217 | Saci_2063 | Saci_2217 | enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | acyl-CoA dehydrogenase. | 0.904 |
Saci_2063 | Saci_2218 | Saci_2063 | Saci_2218 | enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | Conserved 3-hydroxybutyryl-CoA. | 0.406 |
Saci_2063 | etfB | Saci_2063 | Saci_0290 | enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | Electron transfer flavoprotein; Could be both subunits. | 0.567 |
Saci_2217 | Saci_0315 | Saci_2217 | Saci_0315 | acyl-CoA dehydrogenase. | Electron transfer flavoprotein; Looks like a hybrid protein, since it contains both the alpha and the beta domain. | 0.886 |
Saci_2217 | Saci_2063 | Saci_2217 | Saci_2063 | acyl-CoA dehydrogenase. | enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.904 |
Saci_2217 | Saci_2218 | Saci_2217 | Saci_2218 | acyl-CoA dehydrogenase. | Conserved 3-hydroxybutyryl-CoA. | 0.755 |
Saci_2217 | Saci_2342 | Saci_2217 | Saci_2342 | acyl-CoA dehydrogenase. | NADH-quinone oxidoreductase. | 0.650 |
Saci_2217 | crt | Saci_2217 | Saci_1772 | acyl-CoA dehydrogenase. | 3-hydroxybutyryl-CoA dehydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.655 |
Saci_2217 | etfA | Saci_2217 | Saci_0291 | acyl-CoA dehydrogenase. | Electron transfer flavoprotein. | 0.962 |
Saci_2217 | etfB | Saci_2217 | Saci_0290 | acyl-CoA dehydrogenase. | Electron transfer flavoprotein; Could be both subunits. | 0.917 |
Saci_2217 | paaF | Saci_2217 | Saci_1633 | acyl-CoA dehydrogenase. | 3-hydroxybutyryl-CoA dehydratase; Several copies; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.655 |
Saci_2217 | paaF-2 | Saci_2217 | Saci_2285 | acyl-CoA dehydrogenase. | enoyl-CoA hydratase/isomerase. | 0.655 |
Saci_2217 | paaF-3 | Saci_2217 | Saci_2286 | acyl-CoA dehydrogenase. | enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.655 |
Saci_2218 | Saci_0315 | Saci_2218 | Saci_0315 | Conserved 3-hydroxybutyryl-CoA. | Electron transfer flavoprotein; Looks like a hybrid protein, since it contains both the alpha and the beta domain. | 0.511 |
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