STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Saci_2289Conserved Archaeal protein. (136 aa)    
Predicted Functional Partners:
paaK
Phenylacetate-coenzyme A ligase.
 
 
 0.992
Saci_2292
Conserved protein.
 
     0.788
Saci_2291
Conserved Archaeal protein.
       0.776
Saci_1771
Phenylacetic acid catabolic protein.
 
  
 0.764
Saci_1770
Phenylacetic acid catabolic protein.
 
  
 0.760
xylE
Catechol 2,3-dioxygenase.
 
  
 0.705
Saci_2146
phenylacetyl-CoA ligase; Conserved in Sulfolobus.
 
  
 0.657
Saci_2293
4-hydroxyphenylacetate degradation bifunctionali somerase/decarboxylase.
 
  
 0.639
paaX
Phenylacetic acid degradation operon negative regulatory protein.
 
   
 0.562
hpaA
4-hydroxyphenylacetate 3-monooxygenase, oxygenase component.
       0.505
Your Current Organism:
Sulfolobus acidocaldarius DSM 639
NCBI taxonomy Id: 330779
Other names: S. acidocaldarius DSM 639, Sulfolobus acidocaldarius ATCC 33909, Sulfolobus acidocaldarius NCIB 11770
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.