Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Saci_2328 | Saci_2329 | Conserved protein. | Hypothetical protein. | 0.839 |
Saci_2328 | Saci_2330 | Conserved protein. | Conserved Archaeal membrane protein. | 0.844 |
Saci_2328 | Saci_2331 | Conserved protein. | Thermopsin-like protein. | 0.602 |
Saci_2328 | Saci_2332 | Conserved protein. | SPFH domain/Band 7 protein; Predicted signal anchor (SignalP). | 0.569 |
Saci_2329 | Saci_2328 | Hypothetical protein. | Conserved protein. | 0.839 |
Saci_2329 | Saci_2330 | Hypothetical protein. | Conserved Archaeal membrane protein. | 0.839 |
Saci_2329 | Saci_2331 | Hypothetical protein. | Thermopsin-like protein. | 0.594 |
Saci_2329 | Saci_2332 | Hypothetical protein. | SPFH domain/Band 7 protein; Predicted signal anchor (SignalP). | 0.569 |
Saci_2330 | Saci_2328 | Conserved Archaeal membrane protein. | Conserved protein. | 0.844 |
Saci_2330 | Saci_2329 | Conserved Archaeal membrane protein. | Hypothetical protein. | 0.839 |
Saci_2330 | Saci_2331 | Conserved Archaeal membrane protein. | Thermopsin-like protein. | 0.592 |
Saci_2330 | Saci_2332 | Conserved Archaeal membrane protein. | SPFH domain/Band 7 protein; Predicted signal anchor (SignalP). | 0.851 |
Saci_2331 | Saci_2328 | Thermopsin-like protein. | Conserved protein. | 0.602 |
Saci_2331 | Saci_2329 | Thermopsin-like protein. | Hypothetical protein. | 0.594 |
Saci_2331 | Saci_2330 | Thermopsin-like protein. | Conserved Archaeal membrane protein. | 0.592 |
Saci_2331 | Saci_2332 | Thermopsin-like protein. | SPFH domain/Band 7 protein; Predicted signal anchor (SignalP). | 0.783 |
Saci_2332 | Saci_2328 | SPFH domain/Band 7 protein; Predicted signal anchor (SignalP). | Conserved protein. | 0.569 |
Saci_2332 | Saci_2329 | SPFH domain/Band 7 protein; Predicted signal anchor (SignalP). | Hypothetical protein. | 0.569 |
Saci_2332 | Saci_2330 | SPFH domain/Band 7 protein; Predicted signal anchor (SignalP). | Conserved Archaeal membrane protein. | 0.851 |
Saci_2332 | Saci_2331 | SPFH domain/Band 7 protein; Predicted signal anchor (SignalP). | Thermopsin-like protein. | 0.783 |