STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFUA_2G03060Cactin, putative. (568 aa)    
Predicted Functional Partners:
AFUA_1G09380
Uncharacterized protein.
     
 0.775
AFUA_6G07300
mRNA splicing factor (Prp17), putative.
   
 
 0.704
cwc22
Pre-mRNA-splicing factor cwc22; Involved in pre-mRNA splicing.
   
 
  0.677
AFUA_3G08120
PWI domain mRNA processing protein, putative.
     
 0.454
AFUA_2G15760
Poly(A)+ RNA transport protein (UbaA), putative; Belongs to the ubiquitin-activating E1 family.
 
      0.408
Your Current Organism:
Aspergillus fumigatus
NCBI taxonomy Id: 330879
Other names: A. fumigatus Af293, Aspergillus fumigatus Af293
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.