STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFUA_1G05410Ribosome biogenesis protein Kri1. (617 aa)    
Predicted Functional Partners:
AFUA_2G11380
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 
 0.984
AFUA_8G04220
rRNA maturation protein (Nop14), putative.
   
 0.928
AFUA_2G13570
Ribosome biogenesis protein (Bms1), putative.
   
 
 0.917
AFUA_1G16330
Ribosome assembly protein Noc2, putative.
   
 
 0.906
AFUA_4G05880
U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family.
   
  0.895
AFUA_7G05460
Uncharacterized protein.
   
 
 0.887
AFUA_1G11160
Sas10/Utp3 family protein.
   
  
 0.873
AFUA_6G05270
Uncharacterized protein.
   
 
 0.862
AFUA_2G05420
Pre-rRNA processing protein Esf1, putative.
   
  
 0.860
AFUA_1G04240
Small nucleolar ribonucleoprotein complex subunit Utp14, putatrive.
   
 
 0.854
Your Current Organism:
Aspergillus fumigatus
NCBI taxonomy Id: 330879
Other names: A. fumigatus Af293, Aspergillus fumigatus Af293
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