STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFUA_4G11700Leucine Rich Repeat domain protein. (647 aa)    
Predicted Functional Partners:
AFUA_8G04390
Uncharacterized protein.
   
 0.527
sconC
E3 ubiquitin ligase complex SCF subunit sconC; Essential component of the SCF (SKP1-CUL1-F-box protein) E3 ubiquitin ligase complexes, which mediate the ubiquitination and subsequent proteasomal degradation of target proteins. Controls sulfur metabolite repression, probably by mediating the inactivation or degradation of the metR transcription factor (By similarity).
   
 0.527
AFUA_1G12960
SCF ubiquitin ligase complex subunit CulA, putative; Belongs to the cullin family.
    
 0.498
AFUA_6G08220
SCF ubiquitin ligase subunit CulC, putative; Belongs to the cullin family.
    
 0.498
AFUA_5G05790
Ubiquitin ligase subunit HrtA, putative.
    
 0.463
AFUA_7G01290
Uncharacterized protein.
  
     0.428
AFUA_1G02250
Uncharacterized protein.
  
     0.426
Your Current Organism:
Aspergillus fumigatus
NCBI taxonomy Id: 330879
Other names: A. fumigatus Af293, Aspergillus fumigatus Af293
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.