STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GPECTOR_28g858Uncharacterized protein. (1383 aa)    
Predicted Functional Partners:
GPECTOR_32g533
Uncharacterized protein.
    
 0.671
GPECTOR_39g394
Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.
   
  0.440
GPECTOR_96g704
Uncharacterized protein.
    
 0.429
GPECTOR_92g586
Uncharacterized protein.
    
 0.414
GPECTOR_53g111
Uncharacterized protein.
    
 0.414
GPECTOR_84g315
ANK_REP_REGION domain-containing protein.
    
  0.410
GPECTOR_26g468
Roc domain-containing protein.
    
  0.410
GPECTOR_19g215
COR domain-containing protein.
    
  0.410
GPECTOR_13g660
COR domain-containing protein.
    
  0.410
Your Current Organism:
Gonium pectorale
NCBI taxonomy Id: 33097
Other names: G. pectorale, Gonium pectorale O.F.Mueller
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.