STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GPECTOR_18g133Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX. (543 aa)    
Predicted Functional Partners:
GPECTOR_4g808
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
 
 
 0.995
GPECTOR_46g227
Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family.
 
 
 0.991
GPECTOR_69g403
Uncharacterized protein.
  
 
 0.979
GPECTOR_1g294
DUF3479 domain-containing protein.
     
 0.978
GPECTOR_17g932
Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family.
 
 
 0.976
GPECTOR_4g606
Mg-protoporphyrin IX chelatase; Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX. Belongs to the Mg-chelatase subunits D/I family.
   
 
 0.973
GPECTOR_2g1556
Mg-protoporphyrin IX chelatase; Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX. Belongs to the Mg-chelatase subunits D/I family.
   
 
 0.973
GPECTOR_46g248
Uroporphyrinogen_deCOase domain-containing protein.
  
 
 0.969
GPECTOR_34g815
Uncharacterized protein.
  
 
 0.936
GPECTOR_18g148
Uncharacterized protein.
  
 
 0.936
Your Current Organism:
Gonium pectorale
NCBI taxonomy Id: 33097
Other names: G. pectorale, Gonium pectorale O.F.Mueller
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