GPECTOR_10g924 protein (Gonium pectorale) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

GPECTOR_10g924

MTTase N-terminal domain-containing protein. (494 aa)

Predicted Functional Partners:

GPECTOR_1g202

0.847

GPECTOR_23g4

0.805

A0A150FWD4

0.495

GPECTOR_46g248

0.483

GPECTOR_46g227

0.483

GPECTOR_39g502

0.483

GPECTOR_17g932

0.483

GPECTOR_5g429

0.483

GPECTOR_14g213

0.470

GPECTOR_54g200

0.425

Your Current Organism:

Gonium pectorale

NCBI taxonomy Id: 33097
Other names: G. pectorale, Gonium pectorale O.F.Mueller

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A150FWD4	GPECTOR_10g924	A0A150FWD4	A0A150GRB5	PseudoU_synth_2 domain-containing protein.	MTTase N-terminal domain-containing protein.	0.495
A0A150FWD4	GPECTOR_14g213	A0A150FWD4	A0A150GNQ6	PseudoU_synth_2 domain-containing protein.	Uncharacterized protein.	0.711
GPECTOR_10g924	A0A150FWD4	A0A150GRB5	A0A150FWD4	MTTase N-terminal domain-containing protein.	PseudoU_synth_2 domain-containing protein.	0.495
GPECTOR_10g924	GPECTOR_14g213	A0A150GRB5	A0A150GNQ6	MTTase N-terminal domain-containing protein.	Uncharacterized protein.	0.470
GPECTOR_10g924	GPECTOR_17g932	A0A150GRB5	A0A150GKC2	MTTase N-terminal domain-containing protein.	Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family.	0.483
GPECTOR_10g924	GPECTOR_1g202	A0A150GRB5	A0A150H2L1	MTTase N-terminal domain-containing protein.	KH_dom_type_1 domain-containing protein.	0.847
GPECTOR_10g924	GPECTOR_23g4	A0A150GRB5	A0A150GH45	MTTase N-terminal domain-containing protein.	RNase_PH domain-containing protein.	0.805
GPECTOR_10g924	GPECTOR_39g502	A0A150GRB5	A0A150GB19	MTTase N-terminal domain-containing protein.	Uncharacterized protein.	0.483
GPECTOR_10g924	GPECTOR_46g227	A0A150GRB5	A0A150G8L0	MTTase N-terminal domain-containing protein.	Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family.	0.483
GPECTOR_10g924	GPECTOR_46g248	A0A150GRB5	A0A150G8J7	MTTase N-terminal domain-containing protein.	Uroporphyrinogen_deCOase domain-containing protein.	0.483
GPECTOR_10g924	GPECTOR_54g200	A0A150GRB5	A0A150G6G4	MTTase N-terminal domain-containing protein.	S1 motif domain-containing protein.	0.425
GPECTOR_10g924	GPECTOR_5g429	A0A150GRB5	A0A150GWT8	MTTase N-terminal domain-containing protein.	Uroporphyrinogen_deCOase domain-containing protein.	0.483
GPECTOR_14g213	A0A150FWD4	A0A150GNQ6	A0A150FWD4	Uncharacterized protein.	PseudoU_synth_2 domain-containing protein.	0.711
GPECTOR_14g213	GPECTOR_10g924	A0A150GNQ6	A0A150GRB5	Uncharacterized protein.	MTTase N-terminal domain-containing protein.	0.470
GPECTOR_14g213	GPECTOR_54g200	A0A150GNQ6	A0A150G6G4	Uncharacterized protein.	S1 motif domain-containing protein.	0.620
GPECTOR_17g932	GPECTOR_10g924	A0A150GKC2	A0A150GRB5	Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family.	MTTase N-terminal domain-containing protein.	0.483
GPECTOR_17g932	GPECTOR_46g227	A0A150GKC2	A0A150G8L0	Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family.	Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family.	0.921
GPECTOR_1g202	GPECTOR_10g924	A0A150H2L1	A0A150GRB5	KH_dom_type_1 domain-containing protein.	MTTase N-terminal domain-containing protein.	0.847
GPECTOR_1g202	GPECTOR_23g4	A0A150H2L1	A0A150GH45	KH_dom_type_1 domain-containing protein.	RNase_PH domain-containing protein.	0.999
GPECTOR_23g4	GPECTOR_10g924	A0A150GH45	A0A150GRB5	RNase_PH domain-containing protein.	MTTase N-terminal domain-containing protein.	0.805