STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GPECTOR_1g700Uncharacterized protein. (441 aa)    
Predicted Functional Partners:
GPECTOR_46g296
Ubiquitin-like domain-containing protein.
    
  0.629
GPECTOR_10g913
Uncharacterized protein.
   
   0.592
GPECTOR_1g149
Uncharacterized protein.
   
 0.550
GPECTOR_69g456
Mre11_DNA_bind domain-containing protein.
    
  0.534
GPECTOR_13g804
Uncharacterized protein; Belongs to the universal ribosomal protein uL13 family.
   
   0.534
GPECTOR_1g481
Uncharacterized protein.
    
 0.522
GPECTOR_39g507
Ribosomal_L2_C domain-containing protein.
   
 
 0.521
GPECTOR_6g581
Ribosomal_L2_C domain-containing protein.
   
 
 0.520
GPECTOR_44g20
MPN domain-containing protein.
    
  0.513
GPECTOR_33g604
RAMA domain-containing protein.
    
  0.513
Your Current Organism:
Gonium pectorale
NCBI taxonomy Id: 33097
Other names: G. pectorale, Gonium pectorale O.F.Mueller
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.