STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hemD-2uroporphyrinogen-III synthase. (224 aa)    
Predicted Functional Partners:
hemC
Hydroxymethylbilane synthase (porphobilinogen deaminase); Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.
 
 0.990
sirA
uroporphyrinogen-III C-methyltransferase; Belongs to the precorrin methyltransferase family.
  
 
 0.910
hemD
uroporphyrinogen-III synthase.
     
  0.900
ktrA
K+ uptake transporter subunit KtrA.
  
    0.869
ACY40099.1
Hypothetical protein BLBBGE_066.
 
  
 0.727
ktrB
K+ uptake transporter subunit KtrB.
  
    0.693
sirBC
Bifunctional precorrin-2 dehydrogenase/sirohydrochlorin ferrochelatase.
  
 
 0.560
ACY40572.1
Glycoprotease M22 family domain-containing protein.
       0.502
ACY40401.1
Hypothetical protein BLBBGE_392.
  
     0.491
ACY40065.1
Putative ribosome-binding factor A.
 
     0.457
Your Current Organism:
Blattabacterium sp. Bge
NCBI taxonomy Id: 331104
Other names: B. sp. (Blattella germanica) str. Bge, Blattabacterium sp. (Blattella germanica) str. Bge
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