STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
atpBV-type ATP synthase beta chain. (435 aa)    
Predicted Functional Partners:
CCB89365.1
Putative uncharacterized protein.
 
 0.999
atpI
V-type ATP synthase subunit I; Belongs to the V-ATPase 116 kDa subunit family.
 
 0.999
atpD
V-type ATP synthase subunit D.
 
 0.999
atpA
V-type ATP synthase alpha chain; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family.
 
0.999
atpE
V-type proton ATPase subunit E.
 
 0.999
CCB89168.1
Putative cation-transporting ATPase MJ1226.
   
 0.914
tRPE
Anthranilate synthase component 1.
 
      0.802
CCB89370.1
Putative uncharacterized protein.
       0.789
gPD2
Glycerol-3-phosphate dehydrogenase,mitochondrial.
 
      0.678
eno
Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.
   
  
 0.657
Your Current Organism:
Simkania negevensis
NCBI taxonomy Id: 331113
Other names: S. negevensis Z, Simkania negevensis Z, Simkania negevensis str. Z, Simkania negevensis strain Z
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