STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCB89373.1Unknown protein. (97 aa)    
Predicted Functional Partners:
CCB89374.1
Putative uncharacterized protein.
       0.709
CCB89375.1
Unknown protein.
       0.709
CCB89376.1
Putative uncharacterized protein.
       0.709
CCB89377.1
Unknown protein.
       0.709
tal-B
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.
       0.558
CCB89372.1
Unknown protein.
       0.551
atpA
V-type ATP synthase alpha chain; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family.
       0.494
CCB89370.1
Putative uncharacterized protein.
       0.494
atpE
V-type proton ATPase subunit E.
       0.494
CCB89365.1
Putative uncharacterized protein.
       0.473
Your Current Organism:
Simkania negevensis
NCBI taxonomy Id: 331113
Other names: S. negevensis Z, Simkania negevensis Z, Simkania negevensis str. Z, Simkania negevensis strain Z
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.