STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCB90134.1Uncharacterized protein aq_2135. (210 aa)    
Predicted Functional Partners:
CCB88557.1
Rhodanese domain protein.
 
0.955
gloB
Hydroxyacylglutathione hydrolase; Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid.
  
  
 
0.925
CCB89578.1
Putative uncharacterized protein.
   
 
 0.700
pRDX1
Peroxiredoxin-1.
  
  
 0.662
moeZ
Putative adenylyltransferase/sulfurtransferase MoeZ.
 
 
 0.644
CCB87882.1
Erythronolide synthase.
   
 
 0.630
CCB89898.1
Uncharacterized protein slr1261.
 
 
 0.568
ybeY
Putative rRNA maturation factor; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
  
 
 0.477
CCB89771.1
Putative uncharacterized protein.
  
    0.459
CCB89031.1
Putative low molecular weight protein-tyrosine-phosphatase slr0328.
   
   0.453
Your Current Organism:
Simkania negevensis
NCBI taxonomy Id: 331113
Other names: S. negevensis Z, Simkania negevensis Z, Simkania negevensis str. Z, Simkania negevensis strain Z
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.