STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCB90234.1Putative uncharacterized protein. (250 aa)    
Predicted Functional Partners:
CCB90232.1
Putative uncharacterized protein.
      
0.773
CCB90233.1
Putative uncharacterized protein.
      
0.773
CCB90235.1
Putative uncharacterized protein.
      
0.773
CCB90236.1
Putative uncharacterized protein.
      
0.773
CCB90230.1
Putative uncharacterized protein.
      
0.686
CCB90231.1
Putative uncharacterized protein.
      
0.686
CCB90229.1
Unknown protein.
       0.503
Your Current Organism:
Simkania negevensis
NCBI taxonomy Id: 331113
Other names: S. negevensis Z, Simkania negevensis Z, Simkania negevensis str. Z, Simkania negevensis strain Z
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.