STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NFIA_016340Cholinephosphate cytidylyltransferase. (484 aa)    
Predicted Functional Partners:
NFIA_009390
Choline kinase, putative.
  
  
 0.984
NFIA_101450
Choline/ethanolamine kinase, putative.
     
 0.975
NFIA_070600
Aminoalcoholphosphotransferase.
     
 0.781
NFIA_097750
Sn-1,2-diacylglycerol cholinephosphotransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
     
 0.721
NFIA_013990
Ethanolamine kinase, putative.
     
 0.648
NFIA_064080
Phosphatidate cytidylyltransferase, putative.
   
 
 0.561
NFIA_033320
Myo-inositol-phosphate synthase, putative.
     
 0.550
NFIA_010810
Lipin Smp2, putative.
   
  
 0.542
NFIA_016590
Phosphatidyl-N-methylethanolamine N-methyltransferase; Catalyzes the second two steps of the methylation pathway of phosphatidylcholine biosynthesis, the SAM-dependent methylation of phosphatidylmonomethylethanolamine (PMME) to phosphatidyldimethylethanolamine (PDME) and of PDME to phosphatidylcholine (PC).
   
 
 0.539
NFIA_016140
Aminotransferase, class V, putative.
  
  
 0.516
Your Current Organism:
Aspergillus fischeri
NCBI taxonomy Id: 331117
Other names: A. fischeri NRRL 181, Aspergillus fischeri NRRL 181, Neosartorya fischeri NRRL 181
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