Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
NFIA_002330 | NFIA_062330 | A1DJJ4 | A1D5S8 | Siderochrome-iron transporter MirC. | Dimethylallyl tryptophan synthase, putative. | 0.588 |
NFIA_025680 | NFIA_062330 | A1DCD5 | A1D5S8 | Siderochrome-iron transporter, putative. | Dimethylallyl tryptophan synthase, putative. | 0.588 |
NFIA_043650 | NFIA_062330 | A1CUW9 | A1D5S8 | Dimethylallyl tryptophan synthase, putative. | Dimethylallyl tryptophan synthase, putative. | 0.455 |
NFIA_057100 | NFIA_062330 | A1DNJ0 | A1D5S8 | Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. | Dimethylallyl tryptophan synthase, putative. | 0.493 |
NFIA_062330 | NFIA_002330 | A1D5S8 | A1DJJ4 | Dimethylallyl tryptophan synthase, putative. | Siderochrome-iron transporter MirC. | 0.588 |
NFIA_062330 | NFIA_025680 | A1D5S8 | A1DCD5 | Dimethylallyl tryptophan synthase, putative. | Siderochrome-iron transporter, putative. | 0.588 |
NFIA_062330 | NFIA_043650 | A1D5S8 | A1CUW9 | Dimethylallyl tryptophan synthase, putative. | Dimethylallyl tryptophan synthase, putative. | 0.455 |
NFIA_062330 | NFIA_057100 | A1D5S8 | A1DNJ0 | Dimethylallyl tryptophan synthase, putative. | Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. | 0.493 |
NFIA_062330 | ftmPT3 | A1D5S8 | A1DJ20 | Dimethylallyl tryptophan synthase, putative. | Verruculogen prenyltransferase; Catalyzes the prenylation of verruculogen, the last step in the biosynthesis of fumitremorgin A alkaloid. Also active with fumitremorgin B and 12-alpha,13-alpha-dihydroxyfumitremorgin C. Belongs to the tryptophan dimethylallyltransferase family. | 0.418 |
ftmPT3 | NFIA_062330 | A1DJ20 | A1D5S8 | Verruculogen prenyltransferase; Catalyzes the prenylation of verruculogen, the last step in the biosynthesis of fumitremorgin A alkaloid. Also active with fumitremorgin B and 12-alpha,13-alpha-dihydroxyfumitremorgin C. Belongs to the tryptophan dimethylallyltransferase family. | Dimethylallyl tryptophan synthase, putative. | 0.418 |