STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NFIA_069060Aconitate hydratase, putative. (228 aa)    
Predicted Functional Partners:
NFIA_077830
Mitochondrial ribosomal protein, putative.
   
 
 0.932
NFIA_052880
Fe superoxide dismutase, putative.
   
 
 0.914
NFIA_053040
40S ribosomal protein S8.
   
 
 0.911
NFIA_013590
50S ribosomal subunit protein L15.
   
 
 0.903
NFIA_036700
50S ribosomal subunit L7, putative.
   
 
 0.895
NFIA_016200
50S ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.
  
 
 0.893
NFIA_085220
Uncharacterized protein.
   
   0.892
NFIA_066940
Uncharacterized protein.
   
 
 0.891
NFIA_108595
60S ribosomal protein L34.
   
 
 0.890
NFIA_075800
Mitochondrial ribosomal protein S19, putative; Belongs to the universal ribosomal protein uS19 family.
   
 
 0.888
Your Current Organism:
Aspergillus fischeri
NCBI taxonomy Id: 331117
Other names: A. fischeri NRRL 181, Aspergillus fischeri NRRL 181, Neosartorya fischeri NRRL 181
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.