STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NFIA_073400EF-hand superfamily Ca2+-modulated protein. (190 aa)    
Predicted Functional Partners:
NFIA_079300
80 kD MCM3-associated protein.
    
 
 0.894
NFIA_081590
DNA repair protein Rad4, putative.
    
 0.861
NFIA_086910
Rad4 family protein.
    
 0.861
NFIA_037090
UV excision repair protein (RadW), putative.
   
 0.827
NFIA_075490
Dynein heavy chain.
    
 0.797
NFIA_074320
Hydroxyacylglutathione hydrolase, putative.
 
  
   0.765
NFIA_098440
Serine/threonine-protein kinase.
    
 0.748
NFIA_097200
Dynein intermediate chain, putative.
    
 0.718
NFIA_074530
Ubiquitin ligase subunit CulD, putative; Belongs to the cullin family.
     
 0.676
NFIA_092430
Uncharacterized protein.
    
   0.670
Your Current Organism:
Aspergillus fischeri
NCBI taxonomy Id: 331117
Other names: A. fischeri NRRL 181, Aspergillus fischeri NRRL 181, Neosartorya fischeri NRRL 181
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.