STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NFIA_075390DNA repair and transcription protein (Xab2), putative. (854 aa)    
Predicted Functional Partners:
NFIA_106250
SYF2 splicing factor domain protein.
    
 0.999
NFIA_039060
Transcriptional regulator Cwf13/SkiP, putative.
   
 0.999
NFIA_015450
Cell cycle control protein (Cwf4), putative.
   
0.999
NFIA_029020
Pre-mRNA-splicing factor; Involved in mRNA splicing where it associates with cdc5 and the other cwf proteins as part of the spliceosome.
   
 0.999
NFIA_029780
Pre-RNA splicing factor Slt11, putative.
   
 0.999
NFIA_073550
Cell cycle control protein (Cwf8), putative.
   
 0.999
NFIA_078590
Pre-mRNA splicing factor, putative.
    
 0.999
NFIA_088160
Peptidyl prolyl cis-trans isomerase Cyclophilin, putative.
   
 0.999
NFIA_082260
Cell division control protein (Cdc5), putative.
   
 
 0.996
NFIA_037640
Splicing factor 3b, subunit 2, 145kD.
   
 
 0.994
Your Current Organism:
Aspergillus fischeri
NCBI taxonomy Id: 331117
Other names: A. fischeri NRRL 181, Aspergillus fischeri NRRL 181, Neosartorya fischeri NRRL 181
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.